ncbi bioproject database Search Results


ncbi bioproject database  (Biotechnology Information)
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Ncbi Bioproject Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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ncbi bioproject database prjna5732983  (Biotechnology Information)
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( A ) SimPlot genetic similarity plot between SARS-CoV-2 Wuhan-Hu-1 and representative CoV sequences using a 400–base pair (bp) window at a 50-bp step and the Kimura two-parameter model. Phylogenetic trees of regions of disproportional similarities, showing high similarities between SARS-CoV-2 and ZXC21 ( B ) or GD/P1La ( C ), high genetic divergences of all Pan_SL-CoV sequences ( D ), and high similarities between GD/P1La and divergent Bat_SL-CoV sequences ( E ). All positions are relative to Wuhan-Hu-1. Red arrows indicate the discordant clustering relationship of SARS-CoV-2 or Pan_SL-CoV sequences with other CoV sequences. In (A), we use the ORF1a and ORF1b nomenclature consistent with the original publication from of the Wuhan virus ; however, the National Center for Biotechnology Information <t>(NCBI)</t> betacoronavirus reference sequences (see SAR-CoV-2 and NC_045512.2 for an example) designate a single longer stretch called ORF1ab (from 266 to 21,555) that spans both 1a and 1b.
Ncbi Bioproject Database Prjna5732983, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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ncbi centre for biotechnology information database bioproject/prjna663425  (Biotechnology Information)
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Biotechnology Information ncbi centre for biotechnology information database bioproject/prjna663425
( A ) SimPlot genetic similarity plot between SARS-CoV-2 Wuhan-Hu-1 and representative CoV sequences using a 400–base pair (bp) window at a 50-bp step and the Kimura two-parameter model. Phylogenetic trees of regions of disproportional similarities, showing high similarities between SARS-CoV-2 and ZXC21 ( B ) or GD/P1La ( C ), high genetic divergences of all Pan_SL-CoV sequences ( D ), and high similarities between GD/P1La and divergent Bat_SL-CoV sequences ( E ). All positions are relative to Wuhan-Hu-1. Red arrows indicate the discordant clustering relationship of SARS-CoV-2 or Pan_SL-CoV sequences with other CoV sequences. In (A), we use the ORF1a and ORF1b nomenclature consistent with the original publication from of the Wuhan virus ; however, the National Center for Biotechnology Information <t>(NCBI)</t> betacoronavirus reference sequences (see SAR-CoV-2 and NC_045512.2 for an example) designate a single longer stretch called ORF1ab (from 266 to 21,555) that spans both 1a and 1b.
Ncbi Centre For Biotechnology Information Database Bioproject/Prjna663425, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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ncbi database with bioproject id of prjna 1077796  (Biotechnology Information)
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Biotechnology Information ncbi database with bioproject id of prjna 1077796
( A ) SimPlot genetic similarity plot between SARS-CoV-2 Wuhan-Hu-1 and representative CoV sequences using a 400–base pair (bp) window at a 50-bp step and the Kimura two-parameter model. Phylogenetic trees of regions of disproportional similarities, showing high similarities between SARS-CoV-2 and ZXC21 ( B ) or GD/P1La ( C ), high genetic divergences of all Pan_SL-CoV sequences ( D ), and high similarities between GD/P1La and divergent Bat_SL-CoV sequences ( E ). All positions are relative to Wuhan-Hu-1. Red arrows indicate the discordant clustering relationship of SARS-CoV-2 or Pan_SL-CoV sequences with other CoV sequences. In (A), we use the ORF1a and ORF1b nomenclature consistent with the original publication from of the Wuhan virus ; however, the National Center for Biotechnology Information <t>(NCBI)</t> betacoronavirus reference sequences (see SAR-CoV-2 and NC_045512.2 for an example) designate a single longer stretch called ORF1ab (from 266 to 21,555) that spans both 1a and 1b.
Ncbi Database With Bioproject Id Of Prjna 1077796, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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( A ) SimPlot genetic similarity plot between SARS-CoV-2 Wuhan-Hu-1 and representative CoV sequences using a 400–base pair (bp) window at a 50-bp step and the Kimura two-parameter model. Phylogenetic trees of regions of disproportional similarities, showing high similarities between SARS-CoV-2 and ZXC21 ( B ) or GD/P1La ( C ), high genetic divergences of all Pan_SL-CoV sequences ( D ), and high similarities between GD/P1La and divergent Bat_SL-CoV sequences ( E ). All positions are relative to Wuhan-Hu-1. Red arrows indicate the discordant clustering relationship of SARS-CoV-2 or Pan_SL-CoV sequences with other CoV sequences. In (A), we use the ORF1a and ORF1b nomenclature consistent with the original publication from of the Wuhan virus ; however, the National Center for Biotechnology Information (NCBI) betacoronavirus reference sequences (see SAR-CoV-2 and NC_045512.2 for an example) designate a single longer stretch called ORF1ab (from 266 to 21,555) that spans both 1a and 1b.

Journal: Science Advances

Article Title: Emergence of SARS-CoV-2 through recombination and strong purifying selection

doi: 10.1126/sciadv.abb9153

Figure Lengend Snippet: ( A ) SimPlot genetic similarity plot between SARS-CoV-2 Wuhan-Hu-1 and representative CoV sequences using a 400–base pair (bp) window at a 50-bp step and the Kimura two-parameter model. Phylogenetic trees of regions of disproportional similarities, showing high similarities between SARS-CoV-2 and ZXC21 ( B ) or GD/P1La ( C ), high genetic divergences of all Pan_SL-CoV sequences ( D ), and high similarities between GD/P1La and divergent Bat_SL-CoV sequences ( E ). All positions are relative to Wuhan-Hu-1. Red arrows indicate the discordant clustering relationship of SARS-CoV-2 or Pan_SL-CoV sequences with other CoV sequences. In (A), we use the ORF1a and ORF1b nomenclature consistent with the original publication from of the Wuhan virus ; however, the National Center for Biotechnology Information (NCBI) betacoronavirus reference sequences (see SAR-CoV-2 and NC_045512.2 for an example) designate a single longer stretch called ORF1ab (from 266 to 21,555) that spans both 1a and 1b.

Article Snippet: Pan_SL-CoV_GD/P1La sequence was generated by combining Pan_SL-CoV_GD/P1L ( ) with some additional sequences from the National Center for Biotechnology Information (NCBI) BioProject database PRJNA5732983 ( , ) to have a maximal coverage of the complete genome sequence for analysis.

Techniques: Virus